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Visone specifications


Unique identifier OMICS_16866
Name Visone
Alternative name VIsual SOcial NEtworks
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Advanced
Version 2.17
Stability Stable
Maintained Yes




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Visone citations


Assessment of micro RNAs expression in leukemic cells as prognostic markers in chronic lymphocytic leukemia: micro RNAs can predict survival in a course of the disease

PMCID: 5922383
PMID: 29721189
DOI: 10.18632/oncotarget.24927

[…] ifferences between cases with central nervous system infiltration and those without such manifestation. Pallash et al. [] showed low expression of miR-199b in course of CLL, similarly to our results. Visone et al. [] analyzed some micro RNAs expression in CLL patients of different cytogenetic risk groups. They indicated that in newly diagnosed subjects the presence of del 17p, high ZAP-70 expressi […]


The role of ethnic tourism in the food knowledge tradition of Tyrolean migrants in Treze Tílias, SC, Brazil

PMCID: 5889527
PMID: 29625616
DOI: 10.1186/s13002-018-0224-9
call_split See protocol

[…] e when they needed information about Tyrolean dishes or drinks. All 40 interviewees lived in Treze Tílias, but only some of them had a Tyrolean migration background. For visualisation of the network, Visone software was used.For a closer look at the knowledge transmitted in culinary institutions serving ethnic food from Austria, and how it is transmitted, all the restaurants and hotels in Treze Tí […]


Alignment free clustering of large data sets of unannotated protein conserved regions using minhashing

BMC Bioinformatics
PMCID: 5838936
PMID: 29506470
DOI: 10.1186/s12859-018-2080-y

[…] then followed the method presented in [] for construction of the adjacency matrix of the organisms and creation of a phylogenetic network. The result is presented in Fig. . The network is drawn using visone network visualization software [] using the instructions presented in []. The thickness of the edges in the network presented in Fig.  is proportional to the edge weights. We can see that the t […]


Chlorophyll Derivative Modulation of Rhodopsin Signaling Properties through Evolutionarily Conserved Interaction Pathways

Front Mol Biosci
PMCID: 5733091
PMID: 29312953
DOI: 10.3389/fmolb.2017.00085

[…] des and Pich, ). And the network groupings were based on community detection resulting from modularity maximization (Newman, ). The network layout and grouping were calculated using the software tool Visone ( […]


Arc Requires PSD95 for Assembly into Postsynaptic Complexes Involved with Neural Dysfunction and Intelligence

Cell Rep
PMCID: 5656750
PMID: 29045836
DOI: 10.1016/j.celrep.2017.09.045

[…] n (Claudin11 and Lgi1). A network graph of the interactions of the enriched and depleted protein sets is shown in D. The internal network consists of 26 proteins and 44 interactions (visualized using Visone; ). Taken together, these proteomic and in vivo genetic studies show that Arc is tethered to postsynaptic 1.5-MDa signaling complexes containing PSD95, and when these complexes are abolished in […]


Betweenness and diversity in journal citation networks as measures of interdisciplinarity—A tribute to Eugene Garfield

PMCID: 5807500
PMID: 29449751
DOI: 10.1007/s11192-017-2528-2
call_split See protocol

[…] addition to the geodesics. In the meantime, a number of software programs for network analysis have adopted Brandes’ () algorithm for valued graphs. We use Pajek and UCInet for non-valued graphs and visone for analyzing valued ones. While BC can be computed on an asymmetrical matrix, Rao-Stirling diversity and 2 D 3 are evaluated along vectors in either the cited or citing direction of a citation […]

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