VARNA specifications

Information


Unique identifier OMICS_04455
Name VARNA
Alternative name Visualization Applet for RNA
Software type Package/Module
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Java
Computer skills Medium
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Yann Ponty <>

VARNA article

VARNA citation

2016
PMCID: 5093897

[…] stranded rna regions previously described in the hav ires45 were included as constraint information. for the visualization of the structures obtained the rna varna software tool46 was used (http://varna.lri.fr/)., the relative codon deoptimization index (rcdi) estimates the match between the codon usages of a virus vs its host36. although the populations used throughout this study were grown […]

VARNA institution(s)
LRI, UMR CNRS 8623; IGM, UMR CNRS 8621, Université Paris-Sud Orsay; Génomique Analytique, INSERM U511, Paris, France

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