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ViVaMBC specifications


Unique identifier OMICS_10595
Name ViVaMBC
Software type Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Olivier Thas <>

Publication for ViVaMBC

ViVaMBC citation


Biogenesis, Function, and Applications of Virus Derived Small RNAs in Plants

PMCID: 4637412
PMID: 26617580
DOI: 10.3389/fmicb.2015.01237

[…] although vsirnas-based ngs technology is a more effective way to study virus ecology and populations, there is relatively high error rate. thus, several computational pipelines such as vivan (), vivambc (), and layercake (), tools with different applications for analyzing viral deep sequencing data, have been developed., in summary, much of what we know already and what we will uncover […]

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ViVaMBC institution(s)
Department of Mathematical Modeling, Statistics and Bioinformatics, Ghent University, Gent, Belgium

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