ViVar specifications

Information


Unique identifier OMICS_07111
Name ViVar
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Maintainers


  • person_outline Filip Pattyn <>
  • person_outline Piet Robbrecht <>
  • person_outline Evi Michels <>
  • person_outline Bjorn Menten <>
  • person_outline Katleen De Preter <>

ViVar articles

ViVar citation

2017
PMCID: 5469777

[…] indexed 75 bp sequencing was performed on a high-output nextseq500 flow-cell (illumina, california, usa)., fastq files of the samples were automatically analyzed using the vivar software20. the vivar software maps the reads using bowtie221 with–verysensitive-local setting and performs cnv detection using the qdnaseq algorithm22. this algorithm divides the genome in equally sized windows […]

ViVar institution(s)
Center for Medical Genetics, Faculty of Medicine and Health Sciences, Ghent University, Gent, Belgium; Department of Medical Genetics, University Medical Center Utrecht, Utrecht, Netherlands; BioBix, Faculty of Bioscience Engineering, Ghent University, Gent, Belgium

ViVar reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review ViVar