Voronota statistics

info info

Citations per year

info

Popular tool citations

chevron_left Structure visualization chevron_right
info

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

Voronota specifications

Information


Unique identifier OMICS_16800
Name Voronota
Software type Framework/Library
Interface Command line interface
Restrictions to use None
Input data A 3D structure.
Input format .PDB
Output data The balls corresponding to the atoms, the vertices of the Voronoi diagram.
Output format .TXT
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
License MIT License
Computer skills Advanced
Version 1.15
Stability Stable
Maintained No

Download


download.png

Versioning


No version available

Documentation


Maintainer


This tool is not available anymore.

Publication for Voronota

Voronota citation

library_books

Crystal structure correlations with the intrinsic thermodynamics of human carbonic anhydrase inhibitor binding

2018
PeerJ
PMCID: 5831161
PMID: 29503769
DOI: 10.7717/peerj.4412

[…] range 0.17–0.51 å and we conclude that no significant conformational changes occur upon ligand binding., the buried surface area (bsa) and accessible surface area (asa) values were calculated using voronota (v. 1.10.1544, ) program. hydrogen atoms were added to models by perl script. the initial parameters for contacts calculation were set as follows: (1) rolling probe radius was default (1.4 […]


Want to access the full list of citations?
Voronota institution(s)
Institute of Biotechnology, Vilnius University, Vilnius, Lithuania; Faculty of Mathematics and Informatics, Vilnius University, Vilnius, Lithuania
Voronota funding source(s)
This work was supported by European Social Fund under the Global Grant measure.

Voronota reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Voronota