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Voxx specifications


Unique identifier OMICS_19943
Name Voxx
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Windows
Programming languages C++
Computer skills Medium
Stability No
Registration required Yes
Maintained No


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Publication for Voxx

Voxx citations


Bio physically plausible visualization of highly scattering fluorescent neocortical models for in silico experimentation

PMCID: 5333179
PMID: 28251871
DOI: 10.1186/s12859-016-1444-4

[…] to validate the morphological distribution of the neurons in the neocortical column model []. other frameworks have been customized to fulfill specific demands required by the scientists such as voxx [] and vaa3d []. the design goals of the previous frameworks have been focused on scalability and interactivity. consequently, they traded the performance with oversimplified optical models […]


A Multi cell, Multi scale Model of Vertebrate Segmentation and Somite Formation

PMCID: 3188485
PMID: 21998560
DOI: 10.1371/journal.pcbi.1002155

[…] we used for blocking and permeablization. we then cleared the samples and acquired images with a leica sp2 mp microscope using a 63× na 1.2 water-immersion objective. we rendered image volumes using voxx software ., we implemented our computational models as simulations using compucell3d (cc3d) (available for download at http://compucell3d.org), an open-source software package designed […]


A high level 3D visualization API for Java and ImageJ

PMCID: 2896381
PMID: 20492697
DOI: 10.1186/1471-2105-11-274

[…] for biological image processing. numerous image processing packages exist, either commercial (amira, visage imaging; mevislab, mevis; imaris, bitplane; volocity, perkinelmer) or open source (voxx, []; vtk and vtk-based applications such as slicer3d, bioimagexd, and v3d []; ucsf chimera []; volumej [] and volume viewer []). these packages offer excellent solutions for the specific […]

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Voxx institution(s)
Department of Medicine, Division of Nephrology and Indiana Center for Biological Microscopy, Indiana University School of Medicine, Indianapolis, IN, USA; Department of Computer and Information Science, Indiana University-Purdue University at Indianapolis, Indianapolis, IN, USA
Voxx funding source(s)
Supported by the Indiana University Strategic Directions Initiative and a grant (InGen) from the Lilly Foundation to the Indiana University School of Medicine.

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