VPC specifications

Information


Unique identifier OMICS_28159
Name VPC
Alternative name View-based Protein Comparison
Interface Web user interface
Restrictions to use None
Input data Two proteins files or a SCOP ID.
Input format PDB
Output data A compressed file format containing the set of the extracted features, basis vectors and eigenvectors of the corresponding N-dimensional subspaces, and the average of the n-th cosine of the canonical angles.
Output format MATLAB
Computer skills Basic
Stability Stable
Registration required Yes
Maintained No

Maintainers


This tool is not available anymore.

Additional information


The web app is available through identifier and password available in the publication.

Publication for View-based Protein Comparison

VPC institution(s)
Department of Computer Science, Graduate School of Systems and Information Engineering, University of Tsukuba, Ibaraki, Japan; School of Information Science and Electrical Engineering, Kyushu University, Fukuoka, Japan
VPC funding source(s)
Supported by JSPS KAKENHI Grant Number 25540062 and 25700004.

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