VSEARCH specifications

Unique identifier:
OMICS_14601
Interface:
Command line interface
Input format:
FASTA, FASTQ
Operating system:
Unix/Linux, Mac OS, Windows
License:
GNU General Public License version 3.0
Version:
2.3.4
Requirements:
libz, libbz2
Software type:
Package/Module
Restrictions to use:
None
Output format:
FASTA, FASTQ, SAM
Programming languages:
C, C++
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes

versioning

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No versioning.

VSEARCH distribution

download

VSEARCH support

Documentation

Maintainer

  • Torbjørn Rognes <>

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Credits

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Publications

Institution(s)

Department of Informatics, University of Oslo, Oslo, Norway; Department of Microbiology, Oslo University Hospital, Oslo, Norway; Heidelberg Institute for Theoretical Studies, Heidelberg, Germany; Institute for Theoretical Informatics, Karlsruhe Institute of Technology, Karlsruhe, Germany; School of Engineering, University of Glasgow, Glasgow, UK; Warwick Medical School, University of Warwick, Coventry, UK; Department of Ecology, University of Kaiserslautern, Kaiserslautern, Germany; UMR LSTM, CIRAD, Montpellier, France

Funding source(s)

This research was supported in part with computational resources at the University of Oslo provided by UNINETT Sigma2 project NN9383K and funded by the Research Council of Norway; by BBSRC CASE studentship supported by Unilever; by the MRC Cloud Infrastructure for Microbial Bioinformatics (CLIMB) project (MR/L015080/1) through fellowship (MR/M50161X/1) and by the Deutsche Forschungsgemeinschaft (grant #DU1319/1-1).

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