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ANNOVAR is a rapid, efficient tool to annotate functional consequences of genetic variation from high-throughput sequencing data. wANNOVAR provides easy and intuitive web-based access to the most popular functionalities of the ANNOVAR software. It provides simple and intuitive interface to help users determine the functional significance of variants. These include annotating single nucleotide variants and insertions/deletions for their effects on genes, reporting their conservation levels (such as PhyloP and GERP++ scores), calculating their predicted functional importance scores (such as SIFT and PolyPhen scores), retrieving allele frequencies in public databases (such as the 1000 Genomes Project and NHLBI-ESP 5400 exomes), and implementing a ‘variants reduction’ protocol to identify a subset of potentially deleterious variants/genes.

Interface:
Web user interface
Restrictions to use:
None
Computer skills:
Basic
Stability:
Stable
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  • (Chang and Wang, 2012) wANNOVAR: annotating genetic variants for personal genomes via the web. Journal of medical genetics.
    PMID: 22717648
  • Animals
    • Homo sapiens

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