WBSA specifications

Information


Unique identifier OMICS_04077
Name WBSA
Alternative name Web Service for Bisulfite Sequencing Data Analysis
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Input format FASTQ
Output format SAM, HTML report, tab-delimited text, genome browser
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Wenming Zhao <>

Information


Unique identifier OMICS_04077
Name WBSA
Alternative name Web Service for Bisulfite Sequencing Data Analysis
Interface Web user interface
Restrictions to use Academic or non-commercial use
Input format FASTQ
Output format SAM, HTML report, tab-delimited text, genome browser
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Wenming Zhao <>

WBSA article

WBSA citation

2017
PMCID: 5753180

[…] low quality read ends are filtered and adapter sequences are removed via trim galore (http://www.bioinformatics.babraham.ac.uk/projects/trim_galore). wbsa (web service for bisulfite sequencing data analysis) (29) is used to align reads to genome, identify cytosine context, and annotate the methylation levels of cytosine sites. a cpg island […]

WBSA institution(s)
Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, China

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