WebACT specifications

Information


Unique identifier OMICS_17871
Interface Web user interface
Restrictions to use None
Input data A genome sequence.
Input format raw, EMBL or FASTA format
Programming languages Java
Computer skills Basic
Stability Stable
Maintained No

Maintainer


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WebACT article

WebACT citations

 (2)
2015
PMCID: 4634964

[…] [39] against the genome assemblies of all malassezia species to identify the locations of the mat loci in these genomes. the alignments of mat loci between malassezia species were generated through webact (http://www.webact.org/webact/generate) using blastn with an e-value cutoff of 0.0001., m. sympodialis 42132 protein sequences were compared to uniprotkb v2015_02 [71] and the ncbi nucleotide […]

2011
PMCID: 3150448

[…] genomes, because these regions are often not annotated and thus not represented in the non-redundant protein database. pairwise comparisons of genomic regions were performed using webact (www.webact.org) with blastn comparisons. the uniprot, genbank and gene locus accession numbers for each full-length cdia and rhs protein discussed in this work are presented in table s2., the orphan […]

WebACT institution(s)
Centre for Bioinformatics, Division of Molecular Biosciences, Imperial College London, London, UK; Department of Infectious Disease Epidemiology, Imperial College London, London, UK; Pathogen Sequencing Unit, Sanger Institute, Cambridge, UK
WebACT funding source(s)
This work was supported by the Faculties of Life Sciences and Medicine, Imperial College London and the Wellcome Trust.

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