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Offers a convenient platform for bench biologists to access several cutting-edge microarray data analysis tools. Microarray analysis using WebArray can be executed in three steps: 1) uploading and managing files; 2) selecting datasets and methods for analysis; 3) browsing results. Partial web page for dual color array data analysis. While more sophisticated programs are available commercially, WebArray represents an excellent free open source software for microarray analysis that can be used by an average biologist after moderate training. To help biologists to understand the underlying statistics methods, we provide detailed explanations and references for most WebArray functions in the help document.

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WebArrayDB classification

WebArrayDB specifications

Web user interface
Input data:
A microarray intensity files, gene list file and others.
Computer skills:
Restrictions to use:
Output data:
The output files include tab-delimited text files and graphic plots that can be downloaded separately or viewed online.


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Genomic Core Facility, Sidney Kimmel Cancer Center, San Diego, CA, USA; Department of Cancer Genetics, Sidney Kimmel Cancer Center, San Diego, CA, USA

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