WebGIVI specifications

Information


Unique identifier OMICS_18080
Name WebGIVI
Interface Web user interface
Restrictions to use None
Programming languages Javascript, PHP
License BSD 3-clause “New” or “Revised” License
Computer skills Basic
Stability Stable
Maintained Yes

Maintainer


  • person_outline Carl Schmidt <>

Information


Unique identifier OMICS_18080
Name WebGIVI
Software type Package/Module
Interface Command line interface
Restrictions to use None
Programming languages Javascript, PHP
License BSD 3-clause “New” or “Revised” License
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Carl Schmidt <>

Publication for WebGIVI

WebGIVI in publications

 (2)
PMCID: 5536301
PMID: 28759571
DOI: 10.1371/journal.pone.0181900

[…] to note that enrichment in thermoneutral indicates that the genes are actually down-regulated under heat stress. the most common terms were associated with immune function and lipid catabolism. from webgivi, iterms most commonly associated with down-regulated genes include lipid rand immune function terms (). the lipid-associated genes appear to be involved in lipolysis rather than lipogenesis, […]

PMCID: 5148799
PMID: 27856505
DOI: 10.1530/JME-16-0186

[…] the overall function of the pituitary gland at that point in development. the enriched genes were uploaded to amigo 2 for gene ontology (go) term analysis (), pathrings for pathway analysis () and webgivi for text mining and the identification of iterms (l sun & cj schmidt, unpublished observations)., starting gene lists and final enriched genes by day are available in supplementary tables […]


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WebGIVI institution(s)
Department of Animal and Food Sciences, University of Delaware, Newark, DE, USA; Department of Computer Science and Electrical Engineering, University of Maryland Baltimore County, Baltimore, MD, USA; Department of Computer Science, Hangzhou Dianzi University, Hangzhou, Zhejiang Province, China; Department of Computer and Information Sciences, University of Delaware, Newark, DE, USA; Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA
WebGIVI funding source(s)
Supported by NSF grants NSF DBI-1147029 and NSF DBI-1260795.

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