webPIPSA specifications


Unique identifier OMICS_15050
Name webPIPSA
Alternative name Protein Interaction Property Similarity Analysis
Interface Web user interface
Restrictions to use None
Input data A set of protein coordinate files.
Input format PDB, PQR
Output data Electrostatic similarity matrices from an all-pairwise comparison of the proteins which can be subjected to clustering and visualized as epograms or heat maps.
Programming languages Java
License Other
Computer skills Basic
Version 1.6
Stability Stable
Maintained Yes



  • person_outline Stefan Richter <>

Publication for Protein Interaction Property Similarity Analysis

webPIPSA institution(s)
Molecular and Cellular Modeling Group, EML Research gGmbH, Heidelberg, Germany; BIOMS (Center for Modeling and Simulation in the Biosciences), University of Heidelberg, Heidelberg, Germany
webPIPSA funding source(s)
This work was supported by the BMBF Hepatosys programme (grant nos. 0313076 and 0313078C) and the Klaus Tschira Foundation.

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