WGSQuikr statistics

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Citations per year

Citations chart

Popular tool citations

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Popular tools chart

Tool usage distribution map

Tool usage distribution map

Associated diseases

Associated diseases

WGSQuikr specifications


Unique identifier OMICS_07822
Name WGSQuikr
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline David Koslicki <>

Publication for WGSQuikr

WGSQuikr in publication

PMCID: 4853863
PMID: 27138046
DOI: 10.1186/s40168-016-0162-5

[…] both the microbial composition and functional composition of the microbiomes of interest. hence, various tools are developed over the past few years to facilitate analysis of wgs data, such as wgsquikr [] and metaphlan []. in addition to taking advantage of the full microbiome sequenced from wgs, some approaches resort to a small subset of widely conserved marker genes mined from wgs data, […]

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WGSQuikr institution(s)
Mathematics Department, Oregon State University, Corvallis, OR, USA

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