WholeCellViz statistics

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Citations per year

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Popular tool citations

chevron_left Quantitative kinetic modeling chevron_right
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Tool usage distribution map

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Associated diseases

Associated diseases

WholeCellViz specifications

Information


Unique identifier OMICS_08805
Name WholeCellViz
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
License MIT License
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


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Maintainers


  • person_outline WholeCellSimDB <>
  • person_outline Markus Covert <>

Information


Unique identifier OMICS_08805
Name WholeCellViz
Interface Web user interface
Restrictions to use None
Programming languages Javascript, PHP
Computer skills Basic
Stability Stable
Maintained Yes

Maintainers


  • person_outline WholeCellSimDB <>
  • person_outline Markus Covert <>

Publication for WholeCellViz

WholeCellViz in publication

PMCID: 4569901
PMID: 25253262
DOI: 10.1039/c4fd00017j

[…] driving biological project of modeling hiv-1, it becomes a relatively short step to model a slightly larger and more complex organism such as mycoplasma genitalium. a systems biology project called wholecellviz has provided a computational recipe of the hypothetical quantities, localizations, and interactions of every gene product of m. genitalium, dynamically over a full life cycle. […]


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WholeCellViz institution(s)
Department of Bioengineering, Stanford University, Stanford, CA, USA; Graduate Program in Biophysics, Stanford University, Stanford, CA, USA
WholeCellViz funding source(s)
Supported by a NIH Director’s Pioneer Award (5DP1LM01150-05), an Allen Distinguished Investigator Award, an Hellman Faculty Scholarship; a Stanford Bioengineering REU scholarship; NDSEG, NSF, and Stanford Graduate Fellowships.

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