phyx
Desktop

phyx

Performs phylogenetics analyses on trees and sequences. phyx provides a…

Performs phylogenetics analyses on trees and sequences. phyx provides a collection of programs written in C ++ to explore, manipulate, analyze and simulate phylogenetic objects (alignments, trees…

Phylemon
Web

Phylemon

An online platform for phylogenetic and evolutionary analyses of molecular…

An online platform for phylogenetic and evolutionary analyses of molecular sequence data. Phylemon has been developed as a web server that integrates a suite of different tools selected among the…

ReproPhylo
Desktop

ReproPhylo

A Python package designed to deliver reproducible phylogenomic analyses.…

A Python package designed to deliver reproducible phylogenomic analyses. ReproPhylo promotes reproducibility on two levels. First, it eases the complex phylogenomic pipeline design process by…

Arb Tree…
Desktop

Arb Tree Generation

A software package to leverage the utility of the interactive exploratory tools…

A software package to leverage the utility of the interactive exploratory tools offered by ARB with the computational throughput of cloud-based resources. Arb Tree Generation pipeline serves as…

Agalma
Desktop

Agalma

An automated tool that constructs matrices for phylogenomic analyses. The user…

An automated tool that constructs matrices for phylogenomic analyses. The user provides raw Illumina transcriptome data, and Agalma produces annotated assemblies, aligned gene sequence matrices, a…

phyloGenerator
Desktop

phyloGenerator

An easy way for ecologists to make realistic, tenable phylogenies. With…

An easy way for ecologists to make realistic, tenable phylogenies. With phyloGenerator, you can download real DNA sequence data for your species of interest, and then generate a calibrated phylogeny…

augur
Desktop

augur

Tracks evolution from sequence and serological data. Augur is an informatic…

Tracks evolution from sequence and serological data. Augur is an informatic processing pipeline that aims to subsamples, cleans, aligns sequences and build a phylogenetic tree from this data. The…

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