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XGAP specifications


Unique identifier OMICS_24875
Alternative name eXtensible Genotype And Phenotype
Software type Pipeline/Workflow
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes


  • person_outline Morris Swertz <>

Publication for eXtensible Genotype And Phenotype

XGAP in publication

PMCID: 3129328
PMID: 21619703
DOI: 10.1186/1471-2105-12-218

[…] the challenges of accessing a fast evolving landscape of ontology resources and has already enabled large scale ontology integration in the experimental factor ontology [], arrayexpress [], molgenis/xgap [] and gen2phen http://www.gen2phen.org use cases., ontocat is an application suite that combines access to a large number of terms via a java6 package, a rest interface, and an r interface, […]

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XGAP institution(s)
Genomics Coordination Center, Department of Genetics, University Medical Center Groningen and University of Groningen, Groningen, The Netherlands; Groningen Bioinformatics Center, University of Groningen, Haren, The Netherlands; EMBL - European Bioinformatics Institute, Wellcome Trust Genome Campus Hinxton, Cambridge, UK; Experimental Mouse Genetics, Helmholtz Center for Infection Research, Braunschweig, Germany; Center for Medical Biomics, University of Groningen, Groningen, The Netherlands; Physiological Development and Neuroscience, University of Cambridge, Cambridge, UK; Bioinformatics Group, MRC Harwell, Harwell, UK; Information Management Group, School of Computer Science, University of Manchester, Kilburn Building, Manchester, UK; Department of Business and ICT, Faculty of Economics and Business, University of Groningen, Groningen, The Netherlands; Department of Pre-Clinical Veterinary Science and Veterinary Pathology, Faculty of Veterinary Science, University of Liverpool, Liverpool, UK
XGAP funding source(s)
Supported by CASIMIR (funded by the European Commission under contract number LSHG-CT-2006-037811), GEN2PHEN, a FP7 project funded by the European Commission (FP7-HEALTH contract 200754) and NWO (Rubicon Grant 825.09.008).

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