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XGC specifications


Unique identifier OMICS_15164
Name XGC
Alternative name Xenopus Gene Collection
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes


  • person_outline Xenopus Gene Collection Team

XGC citation


Global profiling of stimulus induced polyadenylation in cells using a poly(A) trap

Nat Chem Biol
PMCID: 3805764
PMID: 23995769
DOI: 10.1038/nchembio.1334

[…] data were processed using CASAVA 1.8 pipeline (Illumina).The sequencing reads from two biological replicates of the EA-pulldown cDNA library, and the total RNA library, were mapped with Bowtie to the Xenopus Gene Collection cDNA library of 11,516 full-length clones. We used the DEseq Bioconductor package to compute the differential enrichment of transcripts in the EA-pulldown samples relative to t […]

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