XLmap specifications


Unique identifier OMICS_10140
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Two files are required as input: (1) a protein structure derived either from model prediction software or from empirical data (i.e. PDB or PDBx/mmCIF file), and (2) a table of the cross-linked sites in tab delimited text format.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Version 0.2.1
Stability Stable
Requirements Rpdb, lattice, latticeExtra, Matrix, tcltk, zoo
Maintained Yes


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  • person_outline Bruce J.E. <>

XLmap article

XLmap institution(s)
Department of Genome Sciences, Seattle, WA, USA
XLmap funding source(s)
This study was supported by National Institutes of Health grants: U19-AI107775-01, R01-AI101307-02, R01-HL110879-04, R01-GM086688-06, and R01-GM097112-04.

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