XPN specifications

Information


Unique identifier OMICS_00863
Name XPN
Alternative name cross-Platform Normalization
Software type Application/Script, Package/Module
Interface Command line interface
Restrictions to use None
Input data The gene-expression measurements from two studies, after appropriate preprocessing and imputation.
Output data The average of the normalized values obtained over the repeated runs.
Operating system Unix/Linux, Mac OS, Windows
Programming languages MATLAB
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Andrey Shabalin <>

Publication for cross-Platform Normalization

XPN institution(s)
Department of Statistics and Operations Research, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Department of Mathematical Sciences, Norwegian University of Science and Technology, Trondheim, Norway; Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, NC, USA; Department of Pathology and Laboratory Medicine, University of North Carolina, Chapel Hill, NC, USA; Department of Genetics, University of North Carolina, Chapel Hill, NC, USA
XPN funding source(s)
Supported by National Science Foundation Grant (DMS 0406361), National Cancer Institute Breast SPORE program to University of North Carolina at Chapel Hill (P50-CA58223-09A1), National Cancer Institute (RO1- CA-101227-01) and the Breast Cancer Research Foundation.

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