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Y-chromosome specific assembly software tools | De novo genome sequencing data analysis

The haploid mammalian Y chromosome is usually under-represented in genome assemblies due to high repeat content and low depth due to its haploid nature. One strategy to ameliorate the low coverage of Y sequences is to experimentally enrich…
G T A T C G C T A
GorillaY
Dataset

GorillaY

Offers a draft de novo assembly of the gorilla Y Chromosome. GorillaY was…

Offers a draft de novo assembly of the gorilla Y Chromosome. GorillaY was create by using an integrated strategy to sequence and assemble the gorilla Y Chromosome. The Y Chromosome-specific reads was…

G T A T C G C T A
RecoverY
Desktop

RecoverY

Allows to isolate Y chromosome specific reads for the assembler. RecoverY…

Allows to isolate Y chromosome specific reads for the assembler. RecoverY automates the choice of the abundance threshold and an automated calculation of the Y-mer match threshold. It can remove…

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