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Yabi | An online research environment for grid, high performance and cloud computing

A software system that is adaptable to a range of both pluggable execution and data backends in an open source implementation. Enabling seamless and transparent access to heterogenous HPC environments at its core, Yabi then provides an analysis workflow environment that can create and reuse workflows as well as manage large amounts of both raw and processed data in a secure and flexible way across geographically distributed compute resources. Yabi can be used via a web-based environment to drag-and-drop tools to create sophisticated workflows. Yabi can also be accessed through the Yabi command line which is designed for users that are more comfortable with writing scripts or for enabling external workflow environments to leverage the features in Yabi. Configuring tools can be a significant overhead in workflow environments. Yabi greatly simplifies this task by enabling system administrators to configure as well as manage running tools via a web-based environment and without the need to write or edit software programs or scripts.

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Yabi forum

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Yabi classification

Yabi specifications

Unique identifier:
OMICS_01148
Interface:
Command line interface
Operating system:
Unix/Linux
Parallelization:
MapReduce
Computer skills:
Advanced
Requirements:
memcached, sqlite
Maintained:
Yes
Software type:
Framework/Library
Restrictions to use:
None
Programming languages:
Python
License:
GNU General Public License version 2.0
Stability:
Stable
High performance computing:
Yes

Yabi distribution

versioning

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No versioning.

Yabi support

Maintainer

  • Yabi <>

Credits

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Publications

Institution(s)

Centre for Comparative Genomics, Murdoch, Western Australia

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