Protocols

YASMA specifications

Information


Unique identifier OMICS_15641
Name YASMA
Alternative name Yet Another Statistical Microarray Analysis
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability No
Requirements
R
Maintained No

Versioning


No version available

Maintainer


This tool is not available anymore.

Publication for Yet Another Statistical Microarray Analysis

YASMA citation

call_split

Loading related regulation of gene expression in bone in the contexts of estrogen deficiency, lack of estrogen receptor α and disuse

2010
Bone
PMCID: 2887492
PMID: 19857613
DOI: 10.1016/j.bone.2009.10.021
call_split See protocol

[…] i-gain sets for each array. The data were then loaded into R Project for Statistical Computing (http://www.r-project.org) for further analysis. A two-dimensional loess normalization, from the YASMA5 (Yet Another Statistical Microarray Analysis) library, was performed on each array to correct for any spatial variation within the slide. The LIMMA library (Linear Model for Microarray Analysis) from […]

YASMA institution(s)
School of Crystallography, Birkbeck College, London, UK
YASMA funding source(s)
This work was supported by Bµ[email protected] and the Wellcome Trust.

YASMA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review YASMA