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YBYRÁ specifications


Unique identifier OMICS_09101
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes


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  • person_outline Denis J. Machado

Publication for YBYRÁ

YBYRÁ citations


Systematics and diversification of Anindobothrium Marques, Brooks and Lasso, 2001 (Eucestoda: Rhinebothriidea)

PLoS One
PMCID: 5617167
PMID: 28953933
DOI: 10.1371/journal.pone.0184632
call_split See protocol

[…] atchet and drift [, ] in constrained searches and the remaining default parameters. Finally, putative transformations for selected branches were compiled using the consensus tree obtained by TNT with YBYRÁ [].We also analyzed the previous datasets using maximum likelihood (ML) to identify nodes sensitive to a different optimality criterion. We started by submitting the implied alignment generated […]


Taxonomic revision and cladistic analysis of Avicularia Lamarck, 1818 (Araneae, Theraphosidae, Aviculariinae) with description of three new aviculariine genera

PMCID: 5345366
PMID: 28331414
DOI: 10.3897/zookeys.659.10717

[…] From the ancient Tupi, the classic indigenous language from Brazil, “ybyrá”, meaning “tree”; and “pora”, meaning “those that lives in”. Thus, Ybyrapora means “those that lives in trees”, regarding the arboreal habit of the three species of the genus. […]

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YBYRÁ institution(s)
Inter-institutional Grad Program on Bioinformatics, University of São Paulo, São Paulo, Brazil

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