YeATS specifications

Information


Unique identifier OMICS_11799
Name YeATS
Alternative name Yet Another Tool Suite for analyzing RNA-seq derived transcriptome
Software type Toolkit/Suite
Interface Command line interface
Restrictions to use None
Input data A set of post assembly transcripts
Input format FASTA
Operating system Unix/Linux
Programming languages Perl
License GNU General Public License version 3.0
Computer skills Advanced
Version 2.0
Stability Stable
Source code URL https://codeload.github.com/sanchak/YEATSCODE2/zip/master
Maintained Yes

Versioning


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Documentation


Maintainer


  • person_outline Sandeep Chakraborty <>

Publication for Yet Another Tool Suite for analyzing RNA-seq derived transcriptome

YeATS institution(s)
Plant Sciences Department, University of California, Davis, CA, USA; UC Davis Genome Center Bioinformatics Core Facility, University of California, Davis, CA, USA; Department of Ecology and Evolutionary Biology, University of Connecticut, Storrs, CT, USA; Department of Biological Sciences, Tata Institute of Fundamental Research, Homi Bhaba Road, Mumbai, India; USDA Forest Service Hardwood Tree Improvement and Regeneration Center, Purdue University, West Lafayette, IN, USA
YeATS funding source(s)
This work was supported by support by the California Walnut Board and UC Discovery program.

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