Yara specifications

Information


Unique identifier OMICS_08007
Name Yet another read aligner
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data SAM or BAM format
Biological technology Illumina, Life Technologies
Operating system Unix/Linux, Mac OS, Windows
Programming languages C++
Parallelization OpenMP
License BSD 2-clause “Simplified” License
Computer skills Advanced
Version 0.9.3
Stability Beta
Maintained Yes

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Maintainer


  • person_outline Enrico Siragusa <>

Yara article

Yara citation

2016
PMCID: 4938523

[…] the growth conditions were: photoperiod 16 h, light intensity 200 μe m−2s−1; temperature 22–24°c (light) and 18–20°c (dark); relative humidity 40%. plants were given fertilizer (n:p:k = 16:9:22) (yara) mixed in water (0.3 g/l) in every watering. leaves were harvested for rna extraction when plants were 6 weeks old, frozen in liquid nitrogen, ground with a mortar and a pestle, and rna […]

Yara institution(s)
Department of Mathematics and Computer Science, Freie Universität Berlin, Berlin, Germany
Yara funding source(s)
International Max Planck Research School for Computational Biology and Scientific Computing (to E.S.); the Federal Ministry of Education and Research [16V0080 to D.W.].

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