ZCURVE pipeline

ZCURVE specifications

Information


Unique identifier OMICS_08761
Name ZCURVE
Interface Web user interface
Restrictions to use None
Input data Genome sequence (FASTA or multi FASTA format)
Computer skills Basic
Version 3.0
Stability No
Maintained No

Maintainer


This tool is not available anymore.

Publications for ZCURVE

ZCURVE IN pipelines

 (2)
2015
PMCID: 4408343
PMID: 25908142
DOI: 10.1128/genomeA.00335-15

[…] the ldmnpv-27 strain has a double-stranded circular 164,108-bp dna genome with an average 57.4% gc content. potential open reading frames (orfs) were identified by using the genemarkhmm (2) and zcurve_v software packages (3) and subsequently analyzed manually. putative functions of the orfs were predicted with the help of blast (ncbi) (4) and blast2go (5)., at least 162 orfs of the total […]

2008
PMCID: 2440308
PMID: 18584054
DOI: 10.1371/journal.pone.0002375

[…] isolated by william skeenken in 1935). this h37rv strain has been maintained in mice to prevent loss of virulence and is not subjected to repeated in vitro cultivation., cdss were identified by zcurve 1.0 [65]. transfer rna genes were predicted by trnascan-se [66]. functional annotation of cdss was performed through comparisons to public and in-house databases using blastp, followed […]

ZCURVE institution(s)
Department of Physics, Tianjin University, Tianjin, China

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