zebrafishimage specifications


Unique identifier OMICS_14760
Name zebrafishimage
Alternative name Zebrafish Image Processing
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB
License GNU General Public License version 3.0
Computer skills Advanced
Stability Stable
Maintained Yes


  • Vertebrates
    • Danio rerio



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  • person_outline Johannes Stegmaier <>

Publication for zebrafishimage

zebrafishimage institution(s)
Institute for Applied Computer Science (IAI), Karlsruhe Institute of Technology, Karlsruhe, Germany; Institute for Toxicology and Genetics (ITG), Karlsruhe Institute of Technology, Karlsruhe, Germany; Faculty of Biosciences, Ruprecht-Karls-University of Heidelberg, Heidelberg, Germany
zebrafishimage funding source(s)
This work was supported by EU IP ZF-Health, (FP7-HEALTH-2007-B2), NeuroXsys, the Interreg network for synthetic biology in the Upper Rhine valley (NSB-Upper Rhine), the BMBF funded network EraSysBio and the Helmholtz Association.

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