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ZENBU

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Enables data exploration through "on-demand" data processing and interactive linked-visualizationsthus enabling concurrent views from the same mere primary sequence alignment data which users can upload as BAM or tab-delimited(BED, GFF) files.

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3 user reviews

3 user reviews

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nicolas

highly recommended genome browser to compare in-house NGS data to ENCODE and FANTOM resources

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maxime

Very useful browser. The dynamic data massaging via script offers great possibilities to browse ENCODE data in ways that UCSC does not offer

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Touati

An useful browser which allow to visualise and analyse sequencing dataset "on the fly".

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ZENBU classification

ZENBU specifications

Interface:
Web user interface
Biological technology:
Illumina, Life Technologies, Pacific Biosciences, Roche
Parallelization:
MapReduce
Stability:
Stable
Restrictions to use:
None
Programming languages:
C++, Javascript
Computer skills:
Basic
Maintained:
Yes

Credits

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Publications

Institution(s)

RIKEN Center for Life Science Technologies (Division of Genomic Technologies), Suehiro-cho, Tsurumi-ku, Yokohama, Japan; RIKEN Omics Science Center (OSC), Yokohama, Japan; RIKEN Preventive Medicine and Diagnosis Innovation Program, Wako, Japan; Cancer Science Institute of Singapore, National University of Singapore, Singapore

Link to literature

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