ZiF-Predict statistics

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Citations per year

Number of citations per year for the bioinformatics software tool ZiF-Predict
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ZiF-Predict specifications

Information


Unique identifier OMICS_16888
Name ZiF-Predict
Interface Web user interface
Restrictions to use None
Input data A DNA sequence.
Input format FASTA
Computer skills Basic
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Durai Sundar

Publication for ZiF-Predict

ZiF-Predict citation

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Exploiting the recognition code for elucidating the mechanism of zinc finger protein DNA interactions

2016
BMC Genomics
PMCID: 5260074
PMID: 28155654
DOI: 10.1186/s12864-016-3324-8

[…] een used widely for many applications. There are plethora of tools reported in the literature that are based on assuming modular mode of binding at the molecular level, including - OPEN [], ZiFiT [], Zif-Predict [], ZifBASE []. Modular assembly assumes that the residues at the key positions −1, 3 and 6 on the finger interact with 3 contiguous base pairs on the target DNA strand. The idea of such a […]


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ZiF-Predict institution(s)
Department of Biochemical Engineering & Biotechnology, Indian Institute of Technology (IIT) Delhi, New Delhi, India; Department of Computer Science and Engineering, Indian Institute of Technology (IIT) Delhi, New Delhi, India
ZiF-Predict funding source(s)
Supported by the Department of Biotechnology (DBT) under the IYBA scheme and Department of Information Technology (DIT), Government of India and by a Summer Undergraduate Research Award (SURA) from IIT Delhi.

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